Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935499.1_cds_XP_016481284.1_72628
CDS Infomation

[gene=LOC107802326] [db_xref=GeneID:107802326] [protein=DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like] [partial=3'] [protein_id=XP_016481284.1] [location=join(77350..77829,77917..78092,78406..78519,78866..78974,79075..79161,80998..81116,83130..83277,83497..84096,84169..84447,84903..>85031)] [gbkey=CDS]
Sequence

ATGAGCACACTCCCTATCCTCTTCTTCCCTTCACCTTCTCCTTCAAACTCCATAACCACT
CACTCTCCATTTCTTCCACTTCTCCAAATCCAAACCCCAGGATTCTGTTCCCTCAAGTCC
ATTCACGCTCCGTACAGTTCTAAATCTAGAATCTTCTACAAATTTCCGAGGTTTGTTTTT
CCAACAGAGTCTCAAGACGAAGATGAAGACGAATACGAAGACGAAGACGAAGAAGAGGAT
GATGATGATGACGAAGAAGCGGCGGAAGAATATGACGATGTCGTTTCGGCTGAGATATCC
GACGGAGGCGAAGAGAGCGATGAGGAACTCGAAAATTCCGTTAGCGAAGTGCTGAACATC
GAGGAAACGAGAAAGCAGAGAGTCGAGAAGCTTCGGAGTGAAGTTAGAGAGTTCGGTGAT
GAAATTATCGATGCTAATGAACTTGCTTCTATTTACTCTTTTCGAATCGACAAATTTCAG
CGATTGGCGATTCAAGCGTTTTTGAGAGGTTCATCTGTTGTGGTCTCTGCGCCTACAAGT
AGCGGCAAAACTTTGATTGCTGAAGCTGCCGCTGTTGCTACAGTGGCAAAAGGAAGGAGA
CTATTCTATACTACTCCTCTTAAGGCTTTATCCAATCAGAAATTTCGAGAATTTTGTGAG
ACGTTTGGTGAAAGTAATGTGGGGCTCCTCACTGGAGATTCAGCTGTTAATAGAGATGCT
CAGGTTTTAATTATGACAACTGAGATTTTGCGCAATATGCTGTACCAGAGCGTAGGGGTT
GCTTCCTCAGATGGTGGTCTTCTTCATGTTGATGTAATTGTTTTGGATGAAGTACACTAT
TTAAGTGACATATCTCGGGGTACAGTTTGGGAAGAAATAGTTATTTATTGCCCAAAGGAA
GTTCAACTTATATGTCTTTCGGCGACTGTAGCTAATCCAGATGAGTTGGCTGGATGGATA
GGTCAGATTCATGGTAGAACAGAGTTGGTAACATCATCCAAGCGTCCAATTCCACTGACT
TGGCACTTCGGCACAAAGACAGCTTTAGTACCTCTTCTTGATGACAAAGGCACAAGCATG
AATAGGAAGCTGTCACTCAACTATTTACAGTATGATGAATCTGCCAGTGAACTATACAAG
GAAGAAGGATCTAAAAGAAGAAAATCAAGAAAACGTGAAAATGATGTTCGTCCGCTTTCA
AAGAATGATATAAATAATATTCGCCGCTCACAGGTACCTCAAATTATAGACACATTGTGG
CACCTAAAGGCGAGAGATATGCTTCCAGCAGTTTGGTTCATTTTTAGCAGGAAAGGATGT
GATGCAGCTGTTCAATATCTTGAAGACTGCAGGTTACTGGATGAGTGTGAAACGAGTGAA
GTCGAACTGGCACTCAAGAGGTTCCGTATTCAATACCCTGATGCTGTGCGTGTGTCTGCA
GTGAAAGGCCTCCGCCGAGGAGTGGCTGCACATCATGCTGGCTGTCTCCCCCTTTGGAAA
TCATTCATTGAAGAATTATTTCAGCGAGGTCTAGTTAAGGTTGTCTTTGCTACTGAAACA
CTTGCTGCTGGCATCAATATGCCTGCTAGAACAGCTGTCATTTCATCTCTCAGCAAAAGG
GGTGATGGTGGACGTGTCCAGTTAAGCTCAAATGAGTTATTCCAAATGGCTGGGCGTGCT
GGTCGTAGAGGTATTGATGAAAAGGGTCATGTGGTTCTTGTTCAGACTCCTTATGAAGGG
CCTGAAGAGTGCTGCAAAGTTCTTTTTTCTGGGCTTCAACCTCTTGTTTCACAATTTACT
GCCTCGTATGGGATGGTGATTAATCTTCTTGCGGGGGCCAAAGTTACCCGTAGATCAAGT
GATTTAGATGAGATAAAAGTCTCACGAGCAGGGCGGACTTTGGAAGAAGCAAGGAAGTTA
ATTGAGCAAAGTTTTGGGAATTATGTGGGAAGCAATGTCATGCTTGCCGCAAAAGAGGAG
CTTGCCAGAATAGAAAAGGAAATAGAGACACTTACTTCAGAAATTAGCGAGGAAGCGATT
GATAGGAAGAGCCAGAAGCTCTTAGCGCAATCAGCATATCAGGAGATTGCTGAACTCCAG
GAAGAATTAAGAGCTGAAAAGCGTCTTCGAACAGAACTGCGAAGAAAAATGGAGCTGGAA
AGAGTGTTTTCATTGAAACCTTTACTGAAGGAGCTAGAAGATGGACACCTTCCATTCATG
TCTTTGCACTACAGCGACAGT

Peptide Sequence

PEP ID

XP_016481284.1
PEP Infomation

PREDICTED: DExH-box ATP-dependent RNA helicase DExH15 chloroplastic-like, partial [Nicotiana tabacum]
Sequence

MSTLPILFFPSPSPSNSITTHSPFLPLLQIQTPGFCSLKSIHAPYSSKSRIFYKFPRFVF
PTESQDEDEDEYEDEDEEEDDDDDEEAAEEYDDVVSAEISDGGEESDEELENSVSEVLNI
EETRKQRVEKLRSEVREFGDEIIDANELASIYSFRIDKFQRLAIQAFLRGSSVVVSAPTS
SGKTLIAEAAAVATVAKGRRLFYTTPLKALSNQKFREFCETFGESNVGLLTGDSAVNRDA
QVLIMTTEILRNMLYQSVGVASSDGGLLHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKE
VQLICLSATVANPDELAGWIGQIHGRTELVTSSKRPIPLTWHFGTKTALVPLLDDKGTSM
NRKLSLNYLQYDESASELYKEEGSKRRKSRKRENDVRPLSKNDINNIRRSQVPQIIDTLW
HLKARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQYPDAVRVSA
VKGLRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKR
GDGGRVQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLFSGLQPLVSQFT
ASYGMVINLLAGAKVTRRSSDLDEIKVSRAGRTLEEARKLIEQSFGNYVGSNVMLAAKEE
LARIEKEIETLTSEISEEAIDRKSQKLLAQSAYQEIAELQEELRAEKRLRTELRRKMELE
RVFSLKPLLKELEDGHLPFMSLHYSDS

Transcript Sequence

Gene sequence data has not been registered.